[GE users] gamess info

Reuti reuti at staff.uni-marburg.de
Tue Aug 22 13:18:56 BST 2006


Am 21.08.2006 um 22:02 schrieb lukacm at pdx.edu:

> As i said it worked with rungms. When i run the subgms, it works ,  
> it submit the
> file but then i get these errors in the gamess error log:
>
> error: executing task of job 3799 failed:
> error: commlib error: access denied (client IP resolved to host  
> name "". This is
> not identical to clients host name "")
> error: executing task of job 3799 failed: failed sending task to
> execd at compute-0-6: can't find connection
> error: commlib error: access denied (client IP resolved to host  
> name "". This is
> not identical to clients host name "")
> error: executing task of job 3799 failed: failed sending task to
> execd at compute-0-2: can't find connection
> error: commlib error: access denied (client IP resolved to host  
> name "". This is
> not identical to clients host name "")
> error: executing task of job 3799 failed: failed sending task to
> execd at compute-0-11: can't find connection
> IRCDATA: Undefined variable.
> compute-0-12.local: Connection refused
> compute-0-6: Connection refused
> compute-0-2: Connection refused
> compute-0-11: Connection refused

Did you compile GAMESS to use ssh or rsh? - Reuti


> It looks like the main host, the first one that should be running  
> the master job
> is not started up. Similar errors appear if i run gamess, for  
> multiple machines,
>  when the master node is not the first on in the hostlist settings.  
> For example
> if i run something like:
>
> /home/visible/apps/gamess/ddikick.x /home/visible/apps/gamess/ 
> gamess.01.x exam20
> -ddi 2 2 compute-0-0:cpus=1 compute-0-1:cpus=1 -scr /home/lukacm/scr/
>
> from main node called rocks.research.pdx.edu, the result is the  
> same. However it
> works if i run something like :
>
> ssh compute-0-0 /home/visible/apps/gamess/ddikick.x
> /home/visible/apps/gamess/gamess.01.x exam20 -ddi 2 2  
> compute-0-0:cpus=1
> compute-0-1:cpus=1 -scr /home/lukacm/scr/
>
> I attached an example of the generated script from subgms, for a  
> given job. I
> did not made any modifications to subgms_export.
>
> The environment is set up according to the specifications and bot  
> startgames.sh
> and stopgamess.sh are correctly installed.
>
>
> thank you
>
> martin
>
>
> Quoting Reuti <reuti at staff.uni-marburg.de>:
>
>> Sure, it worked for me.
>>
>> Hi Martin,
>>
>> what problems did you encounter? What did you set up in detail? For
>> me the rungms script was a little bit to convoluted, and so I tried
>> to shrink it as much as possible.
>>
>> -- Reuti
>>
>>
>> Am 21.08.2006 um 21:13 schrieb lukacm at pdx.edu:
>>
>>> Hello,
>>>
>>> i followed the proceedure describe in the mailing lists about how
>>> to integrate
>>> the gamess into SGE, however i could not make it run. I was
>>> wondering if there
>>> is someone who had it succesfully run or who would be using the
>>> rungms script
>>> with SGE.
>>>
>>> the rungms script is working and i can get a parallel execution of
>>> the program
>>> however i was not able to run gamess using the method provided at:
>>> http://gridengine.sunsource.net/servlets/ReadMsg? 
>>> list=users&msgNo=8769
>>>
>>> thank you
>>>
>>> martin
>>>
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>>
>>
>
>
>
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