[GE users] SunGrid Engine & BLAST

Hrishikesh Deshmukh hdeshmuk at gmail.com
Thu Jan 13 17:58:13 GMT 2005


Sure, will keep you posted, i think the most important thing is about
documentation.Still trying to get  it to work but will keep you
posted.

Cheers,
Hrishikesh Deshmukh


On Thu, 13 Jan 2005 12:04:33 -0500, Michael Dinsmore
<jmnemonic at gmail.com> wrote:
> I'm interested in how well this works out for you.  As much of a
> writeup as you care to do wrt getting SGE to work on OS X would be
> appreciated.
> 
> I am purchasing a Mac cluster for BLASTing also.
> 
> I anticipate using iNquiry for my job management, although SGE is an
> option also (as is Apple's Xgrid, as a last resort.)
> 
> I haven't pursued SGE very far, other than to lurk this list, but I
> understand that NFS serving on 10.3 isn't so hot;  expected to greatly
> improve on 10.4.  What exactly the limitations of NFS on 10.3 isn't
> clear, but if you're using straight up Apple nodes I think you'd do
> better with (unencrypted) AFP;  is that an option with SGE?
> 
> You may also consider consulting the cluster/hpc apple listserve:
> 
> http://lists.apple.com/mailman/listinfo/hpc
> 
> On Wed, 12 Jan 2005 15:53:13 -0500, Hrishikesh Deshmukh
> <hdeshmuk at gmail.com> wrote:
> > Hi All,
> >
> > Anybody tried installing/integrating BLAST with Sun Grid Engine.
> > http://developers.sun.com/solaris/articles/integrating_blast.html is
> > the link that shows but i am confused about /etc/dfs/dfstab, i don't
> > see /etc/dfs/dfstab/. I am trying to integrate BLAST with Sun Grid
> > Engine on Mac OS X (emacs).
> >
> > Any pointers/better explanation!!!
> >
> > Thanks,
> > Hrishi
> >
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