[GE users] au state

Wheeler, Dr M.D. mdw10 at leicester.ac.uk
Wed May 11 16:11:16 BST 2005


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i just rebooted my machines and now i get the error:
unable to contact qmaster via "marvin.local" commd using port 535 (service "sge_commd")

help please.....

Martyn

----------------------------------------------
Dr. Martyn D. Wheeler
Department of Chemistry
University of Leicester
University Road
Leicester, LE1 7RH, UK.
Tel (office): +44 (0)116 252 3985
Tel (lab):    +44 (0)116 252 2115
Fax:          +44 (0)116 252 3789
Email:        martyn.wheeler at le.ac.uk
http://www.le.ac.uk/chemistry/staff/mdw10.html
 

> -----Original Message-----
> From: Reuti [mailto:reuti at staff.uni-marburg.de]
> Sent: 11 May 2005 16:04
> To: users at gridengine.sunsource.net
> Subject: Re: [GE users] au state
> 
> 
> What it:
> 
> qalter -w v 1932
> 
> saying? - Reuti
> 
> Wheeler, Dr M.D. wrote:
> > here's some more output
> > 
> > 
> > # qconf -sp molpro
> > pe_name           molpro
> > queue_list        compute-0-0.q compute-0-2.q
> > slots             999
> > user_lists        NONE
> > xuser_lists       NONE
> > start_proc_args   /home/software/scripts/startmolpro.sh 
> -catch_rsh $pe_hostfile
> > stop_proc_args    /home/software/scripts/stopmolpro.sh
> > allocation_rule   $fill_up
> > control_slaves    TRUE
> > job_is_first_task FALSE
> > 
> > 
> > # qstat -r
> > job-ID  prior name       user         state submit/start at 
>     queue      master  ja-task-ID
> > 
> --------------------------------------------------------------
> -------------------------------
> >    1929     0 HCl_H2O_2+ victorm      r     05/11/2005 
> 11:35:38 compute-0- MASTER
> >        Full jobname:     HCl_H2O_2+SP
> >        Master queue:     compute-0-0.q
> >        Requested PE:     molpro 2
> >        Granted PE:       molpro 2
> >        Hard Resources:   h_rt=500:00:00
> >                          virtual_free=2900M
> >                          h_fsize=30G
> >                          arch=lx24-amd64
> >             0 HCl_H2O_2+ victorm      r     05/11/2005 
> 11:35:38 compute-0- SLAVE
> >             0 HCl_H2O_2+ victorm      r     05/11/2005 
> 11:35:38 compute-0- SLAVE
> >    1931     0 formal     nantakorn    qw    05/11/2005 13:08:15
> >        Full jobname:     formal
> >        Requested PE:     molpro 2
> >        Hard Resources:   h_rt=500:00:00
> >                          virtual_free=2900M
> >                          h_fsize=30G
> >                          arch=lx24-amd64
> >    1932     0 p          nantakorn    qw    05/11/2005 13:38:07
> >        Full jobname:     p
> >        Requested PE:     molpro 2
> >        Hard Resources:   h_rt=500:00:00
> >                          virtual_free=2900M
> >                          h_fsize=30G
> >                          arch=lx24-amd64
> > 
> > ----------------------------------------------
> > Dr. Martyn D. Wheeler
> > Department of Chemistry
> > University of Leicester
> > University Road
> > Leicester, LE1 7RH, UK.
> > Tel (office): +44 (0)116 252 3985
> > Tel (lab):    +44 (0)116 252 2115
> > Fax:          +44 (0)116 252 3789
> > Email:        martyn.wheeler at le.ac.uk
> > http://www.le.ac.uk/chemistry/staff/mdw10.html
> >  
> > 
> > 
> >>-----Original Message-----
> >>From: Reuti [mailto:reuti at staff.uni-marburg.de]
> >>Sent: 11 May 2005 13:57
> >>To: users at gridengine.sunsource.net
> >>Subject: Re: [GE users] au state
> >>
> >>
> >>Hi,
> >>
> >>the requested PE also has compute-0-2.q in it's list? How 
> >>many slots did 
> >>you request?
> >>
> >>CU - Reuti
> >>
> >>
> >>Wheeler, Dr M.D. wrote:
> >>
> >>>compute0-0, compute0-1, and compute0-2, are identical, so i 
> >>
> >>figure it should bypass c0-1 and move onto c0-2
> >>
> >>>----------------------------------------------
> >>>Dr. Martyn D. Wheeler
> >>>Department of Chemistry
> >>>University of Leicester
> >>>University Road
> >>>Leicester, LE1 7RH, UK.
> >>>Tel (office): +44 (0)116 252 3985
> >>>Tel (lab):    +44 (0)116 252 2115
> >>>Fax:          +44 (0)116 252 3789
> >>>Email:        martyn.wheeler at le.ac.uk
> >>>http://www.le.ac.uk/chemistry/staff/mdw10.html
> >>> 
> >>>
> >>>
> >>>
> >>>>-----Original Message-----
> >>>>From: Robert Griffiths 
> >>>>[mailto:Robert.Griffiths at mitsubishi-sec-intl.com]
> >>>>Sent: 11 May 2005 13:40
> >>>>To: 'users at gridengine.sunsource.net'
> >>>>Subject: RE: [GE users] au state
> >>>>
> >>>>
> >>>>Well, it looks like the scheduler knows about both 
> >>>>compute-0-1.q and you've
> >>>>filled-up compute-0-0.q. 
> >>>>
> >>>>You must now look at how job 1931 was submitted - does it 
> >>
> >>request any
> >>
> >>>>resources which are available only on compute-0-0 or 
> >>>>compute-0-1. It could
> >>>>be that it's requesting something which *doesn't exist* on 
> >>>>compute-0-2 or
> >>>>your 32-bit node hence it can't be scheduled.
> >>>>
> >>>>Cheers,
> >>>>
> >>>>Rob
> >>>>
> >>>>-----Original Message-----
> >>>>From: Wheeler, Dr M.D. [mailto:mdw10 at leicester.ac.uk] 
> >>>>Sent: 11 May 2005 13:36
> >>>>To: users at gridengine.sunsource.net
> >>>>Subject: RE: [GE users] au state
> >>>>
> >>>>
> >>>># qstat -j
> >>>>scheduling info:            queue "compute-0-1.q" dropped 
> >>>>because it is
> >>>>temporarily not available
> >>>>                           queue "compute-0-0.q" dropped 
> >>>>because it is full
> >>>>
> >>>>Jobs cannot run because resources requested are not available 
> >>>>for parallel
> >>>>job
> >>>>       1931
> >>>>
> >>>>
> >>>>
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