[GE users] qsub and environment vars

rich rich at thevillas.eclipse.co.uk
Tue Jun 20 17:02:08 BST 2006


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Rayson Ho wrote:
> No, the job is still run under your user id.
yes, i even tried  running qsub with -u username but no change
>
> May be the login scripts changed?? 
mmm, it shouldn't have
> Also, the SGE setting "shell start
> mode" can affect how the login scripts get sourced, and thus can
> directly affect the PATH and other environment settings...
ok, i'll have a look at this. thanks
>
> Rayson
>
>
>
> On 6/20/06, rich <rich at thevillas.eclipse.co.uk> wrote:
>> the path variable is indeed different inside the batch job. The strange
>> thing is this used to work fine. Does this now run under some other user
>> id or something?
>>
>> >
>> > Also, are you trying to do a qsub inside a batch job??
>> >
>> > Rayson
>> >
>> >
>> >
>> > On 6/20/06, rich <rich at thevillas.eclipse.co.uk> wrote:
>> >> Does
>> >> qsub run under a different user ID that might cause 'which' not to 
>> find
>> >> the path?
>> >
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>
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