[GE users] submitting parallel jobs

Heba Farouk heba.farouk at yahoo.com
Tue Jul 17 08:37:24 BST 2007


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thank u
i tried adding my PE to the pe_list of the queue, but 
i also got that error:
========================================
qstat -j
scheduling info:            queue instance
"mpi_queue at sc002.sc.bibalex.org" dropped because it is
temporarily not available

Jobs can not run because queue instance is not in
queue list of PE
        55,     56,     57

Jobs can not run because available slots combined
under PE are not in range of job
       55,     56,     57
========================================
any suggestions
--- Rayson Ho <rayrayson at gmail.com> wrote:

> "qstat -j" is your best friend...
> 
> And, did you add the PE to the "pe_list"?? See
> queue_conf(5) manpage...
> 
> Rayson
> 
> 
> 
> On 7/17/07, Heba Farouk <heba.farouk at yahoo.com>
> wrote:
> >
> > i already tried "configuring parallel environment"
> >
>
http://docs.sun.com/app/docs/doc/820-0698/6ncdvjcmd?l=en&a=view#i998778
> >
> > and "Tight Integration of the MPICH2 library into
> SGE"
> >
>
http://gridengine.sunsource.net/howto/mpich2-integration/mpich2-integration.html
> >
> >
> > but no way, all the jobs i submit remain in the
> > pending state for ever
> >
> > any suggestions ??
> >
> > thanks in advance
> >
> >
> > --- Rayson Ho <rayrayson at gmail.com> wrote:
> >
> > > I guess you should start with loose integration
> > > first.
> > >
> > > Read the section "Configuring Parallel
> Environments"
> > > in the admin
> > > guide and sge_pe(5) manpage on how to set up a
> loose
> > > integration. When
> > > you have your MPI programs working, then you can
> try
> > > with the tight
> > > integration, which gives you better job control
> and
> > > accounting.
> > >
> > > Also, if you are building a new cluster, I would
> > > suggest to go with OpenMPI.
> > >
> > > Rayson
> > >
> > >
> > >
> > > On 7/16/07, Heba Farouk <heba.farouk at yahoo.com>
> > > wrote:
> > > > hello there
> > > > i'm newbie to grid engine software and need ur
> > > help.
> > > > i would like to have a simple guide on how to
> run
> > > > parallel jobs using grid engine using mpich2
> > > >
> > > > thanks in advance
> > > >
> > > > Yours
> > > >
> > > > Heba
> > > >
> > > >
> > > >
> > > >
> > > >
> > >
> >
>
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> >
> > Yours
> >
> > Heba
> >
> >
> >
> >
> >
>
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Yours 

Heba



       
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