[GE users] sge6.2 pe bug ?

reuti reuti at staff.uni-marburg.de
Wed Dec 10 14:13:52 GMT 2008


Am 10.12.2008 um 14:47 schrieb mpcsr:

> I work with Colin,
>
> $ qselect -q all.q -l CSR_SITE=sj
> all.q at camunxgrd19.europe.root.pri
> all.q at camunxgrd10.europe.root.pri
> all.q at benny.csr.com
> all.q at brain.csr.com
> all.q at camunxgrd09.europe.root.pri
> all.q at camunxgrd21.europe.root.pri
> all.q at choo-choo.csr.com
> all.q at clyde.csr.com
> all.q at dastardly.csr.com
> all.q at pitstop.csr.com
> all.q at rockets.csr.com
> all.q at snoozy.csr.com
> all.q at softy.csr.com
> all.q at spook.csr.com
> all.q at tom.csr.com
> all.q at yakyak.csr.com
> all.q at zippy.csr.com
> all.q at jerry.europe.root.pri
>
> Submit without the queue name:
>
> $ qsub -pe calibre 8 -l CSR_SITE=sj
> /home/sgeadm/sge/examples/jobs/simple.sh
> Your job 66272 ("simple.sh") has been submitted
> -bash-3.00$ qstat -u mp05
> job-ID  prior   name       user         state submit/start at      
> queue
> slots ja-task-ID
> ---------------------------------------------------------------------- 
> --
> -----------------------------------------
>   66272 0.60500 simple.sh  mp05         r     12/10/2008 13:42:22
> all.q at camunxgrd10.europe.root.     8

Hi, what is:

$ qstat -g t

showing for the used nodes?


> Submit with the queue name:
>
> $ qsub -q all.q -pe calibre 8 -l CSR_SITE=sj
> /home/sgeadm/sge/examples/jobs/simple.sh
> Your job 66281 ("simple.sh") has been submitted
> -bash-3.00$ qstat -u mp05
> job-ID  prior   name       user         state submit/start at      
> queue
> slots ja-task-ID
> ---------------------------------------------------------------------- 
> --
> -----------------------------------------
>   66281 0.60500 simple.sh  mp05         qw    12/10/2008 13:44:24
> 8

What is:

$ qstat -j 66281

saying for the reason of not being scheduled? You can also try: "-w  
v" in qsub or use qalter with the same argument for this job.

-- Reuti


> -bash-3.00$
>
>
> Mike Phillips
>
>> -----Original Message-----
>> From: Andreas.Haas at sun.com [mailto:Andreas.Haas at sun.com]
>> Sent: 10 December 2008 10:13
>> To: users at gridengine.sunsource.net
>> Subject: Re: [GE users] sge6.2 pe bug ?
>>
>> On Wed, 10 Dec 2008, Colin Thomas wrote:
>>
>>> Hi,
>>>
>>> We are running with SGE 6.2 code.
>>>
>>> There would appear to be a buglet in the parallel code .
>>>
>>> qsub -pe calibre 8 -l CSR_SITE=sj
>>> /home/sgeadm/sge/examples/jobs/simple.sh            DOES WORKS
>>> qsub -q all.q -pe calibre 8 /home/sgeadm/sge/examples/jobs/simple.sh
>>> DOES WORKS
>>> qsub -q all.q -pe calibre 8 -l CSR_SITE=sj
>>> /home/sgeadm/sge/examples/jobs/simple.sh DOES NOT WORK - pends
>>>
>>> => with a pe, can specify a queue OR a -l , but NOT both ???
>>
>> Both can be specified. Is -l CSR_SITE=sj available with -q all.q?
>>
>> Regards,
>> Andreas
>>
>>>
>>> Has this been reported/observed before, or have I missed something ?
>>>
>>> I look forward to your combined wisdom..
>>>
>>>
>>>
>>> Best regards
>>>
>>>
>>>
>>> Colin Thomas
>>>
>>> ------------------------------------------------------
>>>
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