[GE users] DRMAA and SGE 6.2

reuti reuti at staff.uni-marburg.de
Wed Dec 10 23:48:57 GMT 2008

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please don't hijack a thread by editing the subject and message, but  
create a new email instead with just the address  
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Am 11.12.2008 um 00:25 schrieb Hugo Hernandez-Mora:
> Hello all,
> I have installed SGE 6.2 on a testing cluster.  Our production  
> cluster is using SGE 6.1u4 and it depends on a java application  
> which uses DRMAA to submit jobs into the cluster.   With the new  
> SGE version, we are trying to use the same java application (using  
> one of our submit hosts as server) and seconds after the server  
> started, java crashed reporting the following error messages:
> # An unexpected error has been detected by Java Runtime Environment:
> #
> #  SIGSEGV (0xb) at pc=0x0000002ba36cd01e, pid=10779,  
> tid=1131698528 # # Java VM: Java HotSpot(TM) 64-Bit Server VM  
> (1.6.0_02-b05 mixed mode) # Problematic frame:
> # C  [libdrmaa.so.1.0+0xc501e]  cl_com_connection_complete_request 
> +0x41e

I don't get, what is running where. On the submit machine you started  
the SGE 6.2 qmaster, or what do you mean by server on a submit host?

-- Reuti

> Just to note, we are sourcing the correct paths for SGE_ROOT,  
> SGE_CELL, etc. in the settings.sh script.  We have disabled DRMAA  
> on the server and it started without problem.  Any suggestions will  
> be very appreciated.
> Thanks in advance,
> -Hugo
> --
> Hugo R. Hernandez-Mora
> System Administrator
> Laboratory of Neuro Imaging, UCLA
> 635 Charles E. Young Drive South, Suite 225
> Los Angeles, CA 90095-7332
> Tel: 310.267.5076
> Fax: 310.206.5518
> hugo.hernandez at loni.ucla.edu
> --
> "Si seus esfor?os, foram vistos com indefren?a, não desanime,
> que o sol faze un espectacolo maravilhoso todas as manhãs
> cuando a maior parte das pessoas, ainda estam durmindo"
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