[GE users] jobs in queue always going to "transfer" status

Sean Davis sdavis2 at mail.nih.gov
Thu Oct 2 01:34:40 BST 2008


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On Wed, Oct 1, 2008 at 8:26 PM, Sean Davis <sdavis2 at mail.nih.gov> wrote:
> On Wed, Oct 1, 2008 at 5:29 PM, Rayson Ho <rayrayson at gmail.com> wrote:
>> On Wed, Oct 1, 2008 at 5:09 PM, Sean Davis <sdavis2 at mail.nih.gov> wrote:
>>>  Any suggestions on
>>> what might be the issue or where I should go to look?
>>
>> Anything in the log files?? The qmaster log and the execd log should
>> at least show something...
>
> 10/01/2008 20:17:28|worker|shakespeare|E|cqueue_list_locate_qinstance("<unknown
> queue>"): cqueue == NULL("<unknown queue>", "<null>", 0, 0
> 10/01/2008 20:17:28|worker|shakespeare|E|writing job finish
> information: can't locate queue "<unknown queue>"
> 10/01/2008 20:17:28|worker|shakespeare|W|job 3254.1 failed on host
> <unknown host> in recognizing job because: execd doesn't know this job
> 10/01/2008 20:20:48|worker|shakespeare|E|denied: job "3254" does not exist

And a couple more lines of interest, all from qmaster:

10/01/2008 20:24:17| timer|shakespeare|W|failed to deliver job 3265.1
to queue "all.q at grass.nci.nih.gov"
10/01/2008 20:24:17| timer|shakespeare|E|got max. unheard timeout for
target "execd" on host "grass.nci.nih.gov", can't deliver job "3265"

The eight jobs before this one went into "run" status, one completed,
and the next one was job 3265; it remains in "transfer" status.

Sean

> Thanks, Rayson.  This looks suspicious.  I'm not sure what to do with
> this.  How does one end up with an unknown queue?  The timing was such
> that I had submitted several jobs for testing to one of the machines
> in question (i.e., qsub -q all.q at machine sleeper.sh).
>
> Sean
>
>>>
>>> Thanks,
>>> Sean
>>>
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