[GE users] Job_Scripts directory

Reuti reuti at staff.uni-marburg.de
Thu Oct 16 15:49:44 BST 2008


Am 16.10.2008 um 16:25 schrieb Bradford, Matthew:

>> -----Original Message-----
>> From: Reuti [mailto:reuti at staff.uni-marburg.de]
>> Sent: 16 October 2008 14:29
>> To: users at gridengine.sunsource.net
>> Subject: Re: [GE users] Job_Scripts directory
>>
>> Hi,
>>
>> Am 16.10.2008 um 14:46 schrieb Bradford, Matthew:
>>
>>> We recently upgraded our scheduler from 6.0u8 to 6.2, and something
>>> odd has happened.
>>>
>>> Whereas we used to see all the job_scripts for pending and running
>>> jobs in <SGE_ROOT>/default/spool/qmaster/job_scripts, we now have
>>> nothing in that directory.
>>>
>>> The cluster is working fine, with users happily submitting
>> jobs which
>>> execute cleanly. When jobs start executing the job_scripts
>> appear  in
>>> the /var/spool/sge on each execution node, but something must have
>>> changed to no longer have the files in the qmaster directory as  
>>> well.
>>>
>>> Any thoughts would be much appreciated.
>>>
>>
>> seems, that for security/performance reasons it's now also put
>> in the BerkelyDB - unless you selected classic spooling.
>>
>> Only for the running jobs, you will find it in the spool
>> directory of the node like before.
>>
>> -- Reuti
>>
>
> Reuti,
>
> Thanks for the info. I don't suppose you know of an easy way to get  
> hold
> of the contents of a job script prior to, or even during, execution do
> you?

During execution it's available in the spool directory of the node  
like before. Maybe you could use a qsub-wrapper to copy it to any  
localtion you like, or try to fall back to classic spooling.

-- Reuti

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