[GE users] path or filename too long

Rayson Ho rayrayson at gmail.com
Sun Sep 21 07:24:43 BST 2008


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On 9/21/08, Iwona Sakrejda <isakrejda at lbl.gov> wrote:
> /software/sge/6.0u4/utilbin/lx24-x86/filestat -atime
> /eliza13/starhf/aknospe/6ele/out/ep_624_st_physics_adc_6038085_raw_3060001_11BED037272D8747C7A9516B0A4C1D9D_11.out
>
> which is understandable because the job could not open the file and failed.

Then, can you use "touch" or a text editor to create this file, and
try again with filestat??

If filestat fails in a similar way, you should be able to use strace
to find out the reason of the failure.

BTW, in the code (daemons/shepherd/builtin_starter.c, function
build_path), when SGE_STAT fails, shepherd prints that error message
in the log and exits. Also, if you are able to compile your own
version of shepherd, try putting a few debug printfs in that function
may help debug the problem.

Rayson



>
> I checked and in this directory the user has 519 other output files with
> similar
> names  that were created today....
>
> Iwona
>
>
> > Rayson
> >
> >
> >
> > On 9/20/08, Iwona Sakrejda <isakrejda at lbl.gov> wrote:
> >
> >
> > > Hi,
> > >
> > > I noticed one of the jobs going into Eqw with a message that follows.
> > > What are the limits?
> > >
> > > Thank You....
> > >
> > > Iwona
> > >
> > >
> > > 09/19/2008 17:56:10 [35140:7379]: can't stat()
> > >
> "/eliza13/starhf/aknospe/6ele/out/ep_624_st_physics_adc_6038085_raw_3060001_11BED037272D8747C7A9516B0A4C1D9D_11.out"
> > > as stdout_path: Value too large for defined data type KRB5CCNAME=none
> > > uid=35140 gid=4002 4002 5008 5463 99999
> > > 09/19/2008 17:56:10 [171:7378]: wait3 returned 7379 (status: 6656;
> > > WIFSIGNALED: 0, WIFEXITED: 1, WEXITSTATUS: 26/
> > > 09/19/2008 17:56:10 [171:7378]: prolog exited with exit status 26
> > > 09/19/2008 17:56:10 [171:7378]: reaped "prolog" with pid 7379
> > >
> > > 09/19/2008 17:56:10 [171:7378]: prolog exited not due to signal
> > > 09/19/2008 17:56:10 [171:7378]: prolog exited with status 26
> > > 09/19/2008 17:56:10 [171:7378]: no tasker to notify
> > > 09/19/2008 17:56:10 [171:7378]: exit states increased from 0 to 1
> > > 09/19/2008 17:56:10 [171:7378]: failed starting prolog
> > >
> > > Shepherd error:
> > > 09/19/2008 17:56:10 [35140:7379]: can't stat()
> > >
> "/eliza13/starhf/aknospe/6ele/out/ep_624_st_physics_adc_6038085_raw_3060001_11BED037272D8747C7A9516B0A4C1D9D_11.out"
> > > as stdout_path: Value too large for defined data type KRB5CCNAME=none
> > > uid=35140 gid=4002 4002 5008 5463 99999
> > > Shepherd pe_hostfile:
> > > pc2107.nersc.gov 1 all.q at pc2107.nersc.gov <NULL>
> > >
> > >
> > >
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