[GE users] path or filename too long

Reuti reuti at staff.uni-marburg.de
Sun Sep 21 10:34:11 BST 2008


Hi,

Am 21.09.2008 um 08:24 schrieb Rayson Ho:

> On 9/21/08, Iwona Sakrejda <isakrejda at lbl.gov> wrote:
>> /software/sge/6.0u4/utilbin/lx24-x86/filestat -atime
>> /eliza13/starhf/aknospe/6ele/out/ 
>> ep_624_st_physics_adc_6038085_raw_3060001_11BED037272D8747C7A9516B0A4 
>> C1D9D_11.out
>>
>> which is understandable because the job could not open the file  
>> and failed.

do you have a large filesystem? Can it be this, and you need to  
upgrade SGE:

http://gridengine.sunsource.net/issues/show_bug.cgi?id=2543

-- Reuti


> Then, can you use "touch" or a text editor to create this file, and
> try again with filestat??
>
> If filestat fails in a similar way, you should be able to use strace
> to find out the reason of the failure.
>
> BTW, in the code (daemons/shepherd/builtin_starter.c, function
> build_path), when SGE_STAT fails, shepherd prints that error message
> in the log and exits. Also, if you are able to compile your own
> version of shepherd, try putting a few debug printfs in that function
> may help debug the problem.
>
> Rayson
>
>
>
>>
>> I checked and in this directory the user has 519 other output  
>> files with
>> similar
>> names  that were created today....
>>
>> Iwona
>>
>>
>>> Rayson
>>>
>>>
>>>
>>> On 9/20/08, Iwona Sakrejda <isakrejda at lbl.gov> wrote:
>>>
>>>
>>>> Hi,
>>>>
>>>> I noticed one of the jobs going into Eqw with a message that  
>>>> follows.
>>>> What are the limits?
>>>>
>>>> Thank You....
>>>>
>>>> Iwona
>>>>
>>>>
>>>> 09/19/2008 17:56:10 [35140:7379]: can't stat()
>>>>
>> "/eliza13/starhf/aknospe/6ele/out/ 
>> ep_624_st_physics_adc_6038085_raw_3060001_11BED037272D8747C7A9516B0A4 
>> C1D9D_11.out"
>>>> as stdout_path: Value too large for defined data type  
>>>> KRB5CCNAME=none
>>>> uid=35140 gid=4002 4002 5008 5463 99999
>>>> 09/19/2008 17:56:10 [171:7378]: wait3 returned 7379 (status: 6656;
>>>> WIFSIGNALED: 0, WIFEXITED: 1, WEXITSTATUS: 26/
>>>> 09/19/2008 17:56:10 [171:7378]: prolog exited with exit status 26
>>>> 09/19/2008 17:56:10 [171:7378]: reaped "prolog" with pid 7379
>>>>
>>>> 09/19/2008 17:56:10 [171:7378]: prolog exited not due to signal
>>>> 09/19/2008 17:56:10 [171:7378]: prolog exited with status 26
>>>> 09/19/2008 17:56:10 [171:7378]: no tasker to notify
>>>> 09/19/2008 17:56:10 [171:7378]: exit states increased from 0 to 1
>>>> 09/19/2008 17:56:10 [171:7378]: failed starting prolog
>>>>
>>>> Shepherd error:
>>>> 09/19/2008 17:56:10 [35140:7379]: can't stat()
>>>>
>> "/eliza13/starhf/aknospe/6ele/out/ 
>> ep_624_st_physics_adc_6038085_raw_3060001_11BED037272D8747C7A9516B0A4 
>> C1D9D_11.out"
>>>> as stdout_path: Value too large for defined data type  
>>>> KRB5CCNAME=none
>>>> uid=35140 gid=4002 4002 5008 5463 99999
>>>> Shepherd pe_hostfile:
>>>> pc2107.nersc.gov 1 all.q at pc2107.nersc.gov <NULL>
>>>>
>>>>
>>>>
>> ---------------------------------------------------------------------
>>>> To unsubscribe, e-mail:
>>>> users-unsubscribe at gridengine.sunsource.net
>>>> For additional commands, e-mail:
>>>> users-help at gridengine.sunsource.net
>>>>
>>>>
>>>>
>>>>
>>>
>>>
>> ---------------------------------------------------------------------
>>> To unsubscribe, e-mail:
>> users-unsubscribe at gridengine.sunsource.net
>>> For additional commands, e-mail:
>> users-help at gridengine.sunsource.net
>>>
>>>
>>>
>>
>> ---------------------------------------------------------------------
>> To unsubscribe, e-mail:
>> users-unsubscribe at gridengine.sunsource.net
>> For additional commands, e-mail:
>> users-help at gridengine.sunsource.net
>>
>>
>
> ---------------------------------------------------------------------
> To unsubscribe, e-mail: users-unsubscribe at gridengine.sunsource.net
> For additional commands, e-mail: users-help at gridengine.sunsource.net


---------------------------------------------------------------------
To unsubscribe, e-mail: users-unsubscribe at gridengine.sunsource.net
For additional commands, e-mail: users-help at gridengine.sunsource.net




More information about the gridengine-users mailing list