[GE users] SSH and host keys

murple andreas.kuntzagk at mdc-berlin.de
Wed Feb 25 12:35:35 GMT 2009


Ok, now I know why I didn't see this bug. Using 6.2 with builtin qrsh.

regards, Andreas

On Tue, 2009-02-24 at 15:27 -0500, craffi wrote:
> On Feb 24, 2009, at 3:26 PM, craffi wrote:
> 
> > The basic issue here is that the Solexa pipeline uses qmake under the
> > hood to to distribute a massive amount of qsub calls. Under the "old"
> > rsh based SGE methods this would cause the system to run out of
> > available ports.
> 
> I mean 'qrsh' in the above paragraph, 'qsub' is a typo ...
> 
> 
> >
> >
> > Prior to SGE 6.2 the workaround was to switch qrsh integration to use
> > SSH; I suspect the problem does not occur or has a much higher limit
> > with the new "builtin" methods in SGE 6.2
> >
> > -Chris
> 
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