[GE users] SDM 6.2U3 won't start

cbyun cbyun at ll.mit.edu
Wed Jul 1 15:39:54 BST 2009


Here you go:

# sdmadm -s sdm62u3 -log com.sun.grid.grm.bootstrap.ParentStartupService=FINE suj -j cs_vm
DEBUG: Add /opt/sdm/lib/sdm-cloud-adapter.jar to system classpath
DEBUG: Add /opt/sdm/lib/sdm-security.jar to system classpath
DEBUG: Add /opt/sdm/lib/sdm-common.jar to system classpath
DEBUG: Add /opt/sdm/lib/sdm-ge-adapter.jar to system classpath
DEBUG: Add /opt/sdm/lib/sdm-starter.jar to system classpath
DEBUG: Add /opt/sdm/lib/ext/jsr173_1.0_api.jar to system classpath
DEBUG: Add /opt/sdm/lib/ext/jaxb-impl.jar to system classpath
DEBUG: Add /opt/sdm/lib/ext/activation.jar to system classpath
DEBUG: Parameter for "cs_vm"
DEBUG: Commandline: ""/usr/java/jdk1.6.0_13/jre/bin/java"   -Djava.security.manager=java.rmi.RMISecurityManager -Djava.security.policy=/var/spool/sdm/sdm62u3/security/java.policy -Djava.security.auth.login.config=/var/spool/sdm/sdm62u3/security/jaas.config -Dcom.sun.grid.grm.bootstrap.systemname=sdm62u3 -Dcom.sun.grid.grm.bootstrap.jvmname=cs_vm -Dcom.sun.grid.grm.bootstrap.localspool="/var/spool/sdm/sdm62u3" -Dcom.sun.grid.grm.bootstrap.dist="/opt/sdm" -Dcom.sun.grid.grm.bootstrap.csInfo="llgriddev:6447" -Dcom.sun.grid.grm.bootstrap.preferencesType="SYSTEM" -Djava.util.logging.manager=com.sun.grid.grm.util.GrmLogManager -Djava.library.path="/opt/sdm/lib/lx-amd64::/opt/sdm/lib/lx-amd64:" -Dcom.sun.grid.grm.bootstrap.isCS="true" -cp "/opt/sdm/lib/sdm-cloud-adapter.jar:/opt/sdm/lib/sdm-security.jar:/opt/sdm/lib/sdm-common.jar:/opt/sdm/lib/sdm-ge-adapter.jar:/opt/sdm/lib/sdm-starter.jar:/opt/sdm/lib/ext/jsr173_1.0_api.jar:/opt/sdm/lib/ext/jaxb-impl.jar:/opt/sdm/lib/ext/activation.jar" -Djava.rmi.server.codebase="file:/opt/sdm/lib/sdm-cloud-adapter.jar file:/opt/sdm/lib/sdm-security.jar file:/opt/sdm/lib/sdm-common.jar file:/opt/sdm/lib/sdm-ge-adapter.jar file:/opt/sdm/lib/sdm-starter.jar file:/opt/sdm/lib/ext/jsr173_1.0_api.jar file:/opt/sdm/lib/ext/jaxb-impl.jar file:/opt/sdm/lib/ext/activation.jar " -Djava.endorsed.dirs="/opt/sdm/lib/ext/endorsed" -Djava.rmi.server.hostname="llgriddev"  ${SDM_MEMORY_HEAP_SIZE_cs_vm} -Dcom.sun.grid.grm.management.connectionTimeout=60  com.sun.grid.grm.bootstrap.JVMImpl  &"
DEBUG: User: "sge"
jvm   host      result message
-----------------------------------------------------
cs_vm llgriddev ERROR  JVM: cs_vm died during
                       startup.
Error: Command has generated error.


Thanks,
- Chansup


> -----Original Message-----
> From: Michal.Bachorik at sun.com [mailto:Michal.Bachorik at sun.com]
> Sent: Wednesday, July 01, 2009 10:35 AM
> To: users at gridengine.sunsource.net
> Subject: Re: [GE users] SDM 6.2U3 won't start
>
> Chansup,
>
> please try to start only cs vm with these options:
>
> sdmadm -s sdm62u3 -log
> com.sun.grid.grm.bootstrap.ParentStartupService=FINE suj -j cs_vm
>
> and send us the output from screen, please.
>
> Regards,
>
> Michal
>
>
> cbyun wrote:
> > I found the following err file on /tmp:
> >
> > # cat err.2730.44
> > java.security.policy: error adding Permission,
> javax.management.MBeanPermission:
> >         java.lang.IllegalArgumentException: Invalid permission: runtime
> >
> > This might be the cause of the start up failure.
> > Anyway, Below is the stack trace that I got:
> >
> > # /bin/sh -x /opt/sdm/bin/sdmadm -d -s sdm62u3 suj
> > + PATH=/bin:/usr/bin:/sbin:/usr/sbin
> > + CLASS=com.sun.grid.grm.cli.SdmAdm
> > ++ dirname /opt/sdm/bin/sdmadm
> > + BASEDIR=/opt/sdm/bin
> > ++ cd /opt/sdm/bin
> > ++ pwd
> > + BASEDIR=/opt/sdm/bin
> > ++ dirname /opt/sdm/bin
> > + SDM_DIST=/opt/sdm
> > + JVM_ARGS=
> > + for arg in '"$@"'
> > + '[' -d = -D ']'
> > + for arg in '"$@"'
> > + '[' -s = -D ']'
> > + for arg in '"$@"'
> > + '[' sdm62u3 = -D ']'
> > + for arg in '"$@"'
> > + '[' suj = -D ']'
> > + '[' /usr/java/default = '' ']'
> > + JAVA=/usr/java/default/bin/java
> > + '[' '!' '(' -x /usr/java/default/bin/java -a '!' -d
> /usr/java/default/bin/java ')' ']'
> > ++ /opt/sdm/util/arch
> > + ARCH=lx26-amd64
> > + export ARCH
> > + case $ARCH in
> > + ARCH=lx-amd64
> > + JVM_ARGS=' -Djava.library.path=/opt/sdm/lib/lx-amd64'
> > + JVM_ARGS=' -Djava.library.path=/opt/sdm/lib/lx-amd64 -
> Djava.endorsed.dirs=/opt/sdm/lib/ext/endorsed'
> > + JVM_ARGS=' -Djava.library.path=/opt/sdm/lib/lx-amd64 -
> Djava.endorsed.dirs=/opt/sdm/lib/ext/endorsed -
> Dcom.sun.grid.grm.management.connectionTimeout=20'
> > + /usr/java/default/bin/java -Djava.library.path=/opt/sdm/lib/lx-amd64 -
> Djava.endorsed.dirs=/opt/sdm/lib/ext/endorsed -
> Dcom.sun.grid.grm.management.connectionTimeout=20 -jar /opt/sdm/lib/sdm-
> starter.jar com.sun.grid.grm.cli.SdmAdm -d -s sdm62u3 suj
> > jvm         host            result message
> > -----------------------------------------------------------------
> > cs_vm       llgriddev.local ERROR  JVM: cs_vm died during
> >                                    startup.
> > com.sun.grid.grm.GrmException: JVM: cs_vm died during startup.
> >         at com.sun.grid.grm.bootstrap.ParentStartupService.start(Unknown
> Source)
> >         at com.sun.grid.grm.ui.component.StartJVMCommand.execute(Unknown
> Source)
> >         at com.sun.grid.grm.ui.impl.CommandServiceImpl.execute(Unknown
> Source)
> >         at
> com.sun.grid.grm.cli.cmd.components.StartJVMCliCommand.execute(Unknown
> Source)
> >         at com.sun.grid.grm.cli.AbstractCli.run(Unknown Source)
> >         at com.sun.grid.grm.cli.SdmAdm.main(Unknown Source)
> >         at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
> >         at
> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:
> 39)
> >         at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorIm
> pl.java:25)
> >         at java.lang.reflect.Method.invoke(Method.java:597)
> >         at com.sun.grid.grm.util.MainWrapper$SystemRunThread.run(Unknown
> Source)
> > executor_vm llgriddev.local ERROR  Timeout. Pid file:
> >                                    /var/spool/sdm/sdm62u3/run/exe
> >                                    cutor_vm at llgriddev.local for
> >                                    JVM: executor_vm not found.
> > com.sun.grid.grm.GrmException: Timeout. Pid file:
> /var/spool/sdm/sdm62u3/run/executor_vm at llgriddev.local for JVM:
> executor_vm not found.
> >         at com.sun.grid.grm.bootstrap.ParentStartupService.start(Unknown
> Source)
> >         at com.sun.grid.grm.ui.component.StartJVMCommand.execute(Unknown
> Source)
> >         at com.sun.grid.grm.ui.impl.CommandServiceImpl.execute(Unknown
> Source)
> >         at
> com.sun.grid.grm.cli.cmd.components.StartJVMCliCommand.execute(Unknown
> Source)
> >         at com.sun.grid.grm.cli.AbstractCli.run(Unknown Source)
> >         at com.sun.grid.grm.cli.SdmAdm.main(Unknown Source)
> >         at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
> >         at
> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:
> 39)
> >         at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorIm
> pl.java:25)
> >         at java.lang.reflect.Method.invoke(Method.java:597)
> >         at com.sun.grid.grm.util.MainWrapper$SystemRunThread.run(Unknown
> Source)
> > rp_vm       llgriddev.local ERROR  JVM: rp_vm died during
> >                                    startup.
> > com.sun.grid.grm.GrmException: JVM: rp_vm died during startup.
> >         at com.sun.grid.grm.bootstrap.ParentStartupService.start(Unknown
> Source)
> >         at com.sun.grid.grm.ui.component.StartJVMCommand.execute(Unknown
> Source)
> >         at com.sun.grid.grm.ui.impl.CommandServiceImpl.execute(Unknown
> Source)
> >         at
> com.sun.grid.grm.cli.cmd.components.StartJVMCliCommand.execute(Unknown
> Source)
> >         at com.sun.grid.grm.cli.AbstractCli.run(Unknown Source)
> >         at com.sun.grid.grm.cli.SdmAdm.main(Unknown Source)
> >         at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
> >         at
> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:
> 39)
> >         at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorIm
> pl.java:25)
> >         at java.lang.reflect.Method.invoke(Method.java:597)
> >         at com.sun.grid.grm.util.MainWrapper$SystemRunThread.run(Unknown
> Source)
> > Error: com.sun.grid.grm.GrmException: Command has generated error.
> >         at
> com.sun.grid.grm.cli.cmd.components.StartJVMCliCommand.execute(Unknown
> Source)
> >         at com.sun.grid.grm.cli.AbstractCli.run(Unknown Source)
> >         at com.sun.grid.grm.cli.SdmAdm.main(Unknown Source)
> >         at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
> >         at
> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:
> 39)
> >         at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorIm
> pl.java:25)
> >         at java.lang.reflect.Method.invoke(Method.java:597)
> >         at com.sun.grid.grm.util.MainWrapper$SystemRunThread.run(Unknown
> Source)
> > + exit 2
> >
> >
> > Also, I changed the logging level but I don't get cs_vm log.
> >
> > Here is what I have in the logging.properties:
> >
> > # Default global logging level.
> > # Loggers and Handlers may override this level
> > .level=FINE
> > javax.level=SEVERE
> >
> > com.sun.grid.grm.service.level=FINE
> >
> > # --- grid.grm logging level ---
> > com.sun.grid.grm.level=FINE
> >
> > # --- FileHandler ---
> > java.util.logging.FileHandler.level=ALL
> >
> java.util.logging.FileHandler.formatter=com.sun.grid.grm.util.GrmFormatter
> > java.util.logging.FileHandler.pattern=${log_dir}/${jvm_name}-%g.log
> > java.util.logging.FileHandler.append=true
> > <cure here>
> >
> > # find /var/spool/sdm/sdm62u3/log -ls
> > 4406418    4 drwxr-xr-x   2 sge      root         4096 Jun 30 11:24
> /var/spool/sdm/sdm62u3/log
> > 4406510    0 -rw-r--r--   1 root     root            0 Jun 30 11:09
> /var/spool/sdm/sdm62u3/log/executor_vm.stderr
> > 4406511    0 -rw-r--r--   1 root     root            0 Jun 30 11:09
> /var/spool/sdm/sdm62u3/log/executor_vm-0.log.lck
> > 4406516    4 -rw-r--r--   1 root     root          330 Jun 30 11:08
> /var/spool/sdm/sdm62u3/log/executor_vm-0.log.1
> > 4406515    0 -rw-r--r--   1 root     root            0 Jun 30 11:07
> /var/spool/sdm/sdm62u3/log/executor_vm-0.log.1.lck
> > 4406512   96 -rw-r--r--   1 root     root        90359 Jun 30 11:10
> /var/spool/sdm/sdm62u3/log/executor_vm-0.log
> > 4406505    0 -rw-r--r--   1 root     root            0 Jun 30 11:09
> /var/spool/sdm/sdm62u3/log/executor_vm.stdout
> >
> > There is not much valuable information in executor_vm-0.log. It is
> waiting for cs_vm and failed.
> >
> > Any further suggestions are welcome.
> >
> > Thanks,
> > - Chansup
> >
> >
> >
> >
> >> -----Original Message-----
> >> From: Michal.Bachorik at sun.com [mailto:Michal.Bachorik at sun.com]
> >> Sent: Tuesday, June 30, 2009 10:06 AM
> >> To: users at gridengine.sunsource.net
> >> Cc: Byun, Chansup
> >> Subject: Re: [GE users] SDM 6.2U3 won't start
> >>
> >> also, you should increase the logging level (in
> >> <sdp_spool>/logging.properties).
> >>
> >> regards,
> >>
> >> m.
> >>
> >> easymf wrote:
> >>
> >>> chansup,
> >>>
> >>>
> >>> try to start it with "sdmadm -d -s sdm62u3 suj". it will print a
> >>> stacktrace .. and also, look at the log files in sdm spool dir.
> >>> as all of your jvms has "died" (refused to start), it seems to be a
> >>> problem with installation or configuration.
> >>>
> >>> regards,
> >>>
> >>> michal
> >>>
> >>> cbyun wrote:
> >>>
> >>>
> >>>> Hi,
> >>>>
> >>>> I just installed SDM from SGE 6.2u3 release without any errors.
> >>>> Then, I tried to start JVMs but none of them started with the
> following
> >>>>
> >> error:
> >>
> >>>> # sdmadm -s sdm62u3 suj
> >>>> jvm         host            result message
> >>>> -----------------------------------------------------------------
> >>>> cs_vm       llgriddev.local ERROR  JVM: cs_vm died during
> >>>>                                    startup.
> >>>> executor_vm llgriddev.local ERROR  Timeout. Pid file:
> >>>>                                    /var/spool/sdm/sdm62u3/run/exe
> >>>>                                    cutor_vm at llgriddev.local for
> >>>>                                    JVM: executor_vm not found.
> >>>> rp_vm       llgriddev.local ERROR  JVM: rp_vm died during
> >>>>                                    startup.
> >>>> Error: Command has generated error.
> >>>>
> >>>> I used Java 1.6.
> >>>>
> >>>> # echo $JAVA_HOME
> >>>> /usr/java/latest
> >>>>
> >>>> # /usr/java/latest/bin/java -version
> >>>> java version "1.6.0_13"
> >>>> Java(TM) SE Runtime Environment (build 1.6.0_13-b03)
> >>>> Java HotSpot(TM) 64-Bit Server VM (build 11.3-b02, mixed mode)
> >>>>
> >>>> Any suggestions for further troubleshooting?
> >>>>
> >>>> Thanks,
> >>>> - Chansup
> >>>>
> >>>> ------------------------------------------------------
> >>>>
> >>>>
> >>
> http://gridengine.sunsource.net/ds/viewMessage.do?dsForumId=38&dsMessageId
> >> =204401
> >>
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> >>>>
> >> unsubscribe at gridengine.sunsource.net].
> >>
> >>>>
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> >>>
> >>>
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> >> =204552
> >>
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