[GE users] SGE noobie

biostat adam at greenhodge.net
Tue Jun 2 16:46:33 BST 2009


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>Did you source the $SGE_ROOT/$SGE_CEL?L/common/settings.sh? (or .csh) 
>before you use a SGE command? Even for the "-help" output?

Yeah, I included that in the last post:

> qmaster: sge% $SGE_ROOT/bin/$ARCH/sge_qmaster -help | head -1 ARCH:
> Undefined variable. qmaster: sge% echo $ARCH ARCH: Undefined
> variable. qmaster: sge% source /SGE6/default/common?/settings.csh 
> qmaster: sge% echo $ARCH ARCH: Undefined variable.

>> Hmmm. When I echoed $TMPDIR, i got this: 
>> /var/folders/WF/WFbN?EBgSHa8jWCIrXBrvnE++?+yU/-Tmp-/

>Looks a bit odd, but it should point to a local directory. You could set 
>it simply to "/tmp" to be sure it's a valid and working local directory.

Isn't /var a local directory? Or by local you mean within the $SGE_ROOT hiearchy?

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