[GE users] DRMAA GDI mismatch exception

rhierlmeier richard.hierlmeier at sun.com
Thu Mar 19 15:33:53 GMT 2009


Hi,

zliu wrote:
> Hi,
> 
> We have an application that uses DRMAA.  Recently we upgraded SGE 6.2u1 from 6.1. After the upgrade, we saw this "GDI mismatch" exception hundreds of times a day.  We never had this exception before. 
> 
> Throwable = org.ggf.drmaa.DrmCommunicationException: GDI mismatch
>         at com.sun.grid.drmaa.SessionImpl.nativeGetJobProgramStatus(Native Method)
>         at com.sun.grid.drmaa.SessionImpl.getJobProgramStatus(SessionImpl.java:213)
>         at execution.DRMAAQueueChecker.run(DRMAAQueueChecker.java:64)
> 
> The application uses DRMAA version 1.0 before and after the upgrade. We are using SGE 6.1u2 with the classic spooling method.  We are running the cluster with a customized Rocks Cluster v4.3 and CentOS release 4.5, kernel 2.6.9-55.0.2.ELsmp, x86_64.
> 
> Does anyone have any idea about this error? 

I assume that your application uses an old libdrmaa.so. Please ensure that the 
LD_LIBRARY_PATH and/or the java system property java.library.path is correct.
It must be set to SGE_ROOT/lib/<arch>



Richard

> 
> Thanks in advance.
> 
> 
> ================
> Zhizhong Liu
> Programmer Analyst, LONI Pipeline
> Laboratory of Neuro Imaging, UCLA
> 635 Charles E. Young Drive South, Suite 225
> Los Angeles, CA 90095-7332
> zliu at loni.ucla.edu
> ================
> 
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