[GE users] Sporadic errors in array tasks with a PE

kisielk kamil at zymeworks.com
Thu Apr 15 17:53:12 BST 2010


I'm still having this problem, it seems to be limited to this user's job for the time being.

For some more info, the cluster is "stateless" and does not NFS mount the SGE directory. Instead it has a tmpfs to which all the SGE binaries, spool directory, etc are copied to. This is set up mostly according to the info in the howto. These same nodes have no problem running other jobs, including other array jobs it seems.

Not sure how to go about debugging this...

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