[GE users] SGE 6.2u5: Strange Output from messages sent after a job task failure.

wlee_hess wlee at hess.com
Mon Mar 8 15:03:17 GMT 2010


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To discussion group,

I've got SGE 6.2u5 running now and so far so good.  However, When I simulate a failed Job-array task, it looks like part of the output that gets e-mailed to the SGE admins is not formatted right.  See a portion of the output below.

=============================================
Job 1089 caused action: Job-array task 1089.2544 set to ERROR
 User        = user1
 Queue       = prod.low.q at gmynode.mydomain.com
 Start Time  = 03/05/2010 10:59:27
 End Time    = 03/05/2010 14:31:43
failed rescheduling on application error:03/05/2010 14:31:43 [2084:23522]: exit_status of job start = 100
Shepherd trace:
03/05/2010 10:59:27 [2084:23522]: shepherd called with uid = 0, euid = 2084
03/05/2010 10:59:27 [2084:23522]: starting up 6.2u5
03/05/2010 10:59:27 [2084:23522]: setpgid(23522, 23522) returned 0
03/05/2010 10:59:27 [2084:23522]: do_core_binding: "binding" parameter not found in config file
03/05/2010 10:59:27 [2084:23522]: no prolog script to start
03/05/2010 10:59:27 [2084:23522]: parent: forked "job" with pid 23523
03/05/2010 10:59:27 [2084:23522]: parent: job-pid: 23523
03/05/2010 10:59:27 [2084:23523]: child: starting son(job, /mydir/prod/gpu64/bin/calc_Kir, 0);
03/05/2010 10:59:27 [2084:23523]: pid=23523 pgrp=23523 sid=23523 old pgrp=23522 getlogin()=<no login set>
03/05/2010 10:59:27 [2084:23523]: reading passwd information for user 'user1'
03/05/2010 10:59:27 [2084:23523]: setosjobid: uid = 0, euid = 2084
03/05/2010 10:59:27 [2084:23523]: setting limits
03/05/2010 10:59:27 [2084:23523]: RLIMIT_CPU setting: (soft 0^HINFINITY hard 0^HINFINITY) resulting: (soft 0^HINFINITY hard 0^HINFINITY)
03/05/2010 10:59:27 [2084:23523]: RLIMIT_FSIZE setting: (soft 0^HINFINITY hard 0^HINFINITY) resulting: (soft 0^HINFINITY hard 0^HINFINITY)
03/05/2010 10:59:27 [2084:23523]: RLIMIT_DATA setting: (soft 0^HINFINITY hard 0^HINFINITY) resulting: (soft 0^HINFINITY hard 0^HINFINITY)
03/05/2010 10:59:27 [2084:23523]: RLIMIT_STACK setting: (soft 0^HINFINITY hard 0^HINFINITY) resulting: (soft 0^H
=============================================

Notice the part of the message where "INFINITY" shows up.  Looks like some strange control characters are in the output.  Has anyone else seen this before?  Is this a possible bug?  I didn't see this in the SGE 6.1u4 version we ran before moving to SGE 6.2u5.

I do get the above messages sent to my Blackberry and from it I do see the following for example:

03/05/2010 10:59:27 [2084:23523]: RLIMIT_CPU setting: (soft 0INFINITY hard 0INFINITY) resulting: (soft 0INFINITY hard 0INFINITY)


Kind Regards,

Wayne Lee

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