[GE users] Slots and CPU's

kisielk kamil at zymeworks.com
Mon Mar 8 19:38:43 GMT 2010


> Well I tried the syntax but the jobs just pend with qw status even though resources seem to be available ...
> 
> murphygb courage ~/ansys/sge : qstat -f | grep fea | grep g70
> fea.q at usorl03g700              BIP   0/0/16         8.21     lx24-amd64
> fea.q at usorl03g701              BIP   0/1/16         22.69    lx24-amd64    a
> murphygb courage ~/ansys/sge : qconf -sq fea.q
> qname                 fea.q
> hostlist              @sharedmem @distmem
> seq_no                0,[@distmem8gb=1],[@distmem16gb=2],[@distmemfast=3]
> load_thresholds       np_load_avg=1.0
> suspend_thresholds    NONE
> nsuspend              1
> suspend_interval      00:05:00
> priority              0
> min_cpu_interval      00:05:00
> processors            UNDEFINED
> qtype                 BATCH INTERACTIVE
> ckpt_list             NONE
> pe_list               make fea
> rerun                 FALSE
> slots                 16
> tmpdir                /work
> shell                 /bin/bash
> prolog                /usw/gridengine/siemens_util/ansys.prolog
> epilog                NONE
> shell_start_mode      posix_compliant
> starter_method        NONE
> suspend_method        NONE
> resume_method         NONE
> terminate_method      NONE
> notify                00:00:60
> owner_list            NONE
> user_lists            NONE
> xuser_lists           NONE
> subordinate_list      NONE
> complex_values        fea=TRUE,hack1=TRUE,[@sharedmem=fea=TRUE,hack1=TRUE, \
>                       hack2=TRUE,hack3=TRUE],[@distmemfast=fea=TRUE, \
>                       hack1=TRUE,hack2=TRUE]
> projects              NONE
> xprojects             NONE
> calendar              NONE
> initial_state         default
> s_rt                  INFINITY
> h_rt                  INFINITY
> s_cpu                 INFINITY
> h_cpu                 INFINITY
> s_fsize               INFINITY
> h_fsize               INFINITY
> s_data                INFINITY
> h_data                INFINITY
> s_stack               INFINITY
> h_stack               INFINITY
> s_core                INFINITY
> h_core                INFINITY
> s_rss                 INFINITY
> h_rss                 INFINITY
> s_vmem                INFINITY
> h_vmem                INFINITY
> murphygb courage ~/ansys/sge : cat in.ksh
> #!/bin/ksh
> 
> /usw/ansyslx/v110/ansys/bin/ansys110 -b -NP 1 -j pin_block < in.dat
> 
> murphygb courage ~/ansys/sge : qsub -pe fea 1 in.ksh
> Your job 112969 ("in.ksh") has been submitted
> murphygb courage ~/ansys/sge : qstat
> job-ID  prior   name       user         state submit/start at     queue                          slots ja-task-ID
> -----------------------------------------------------------------------------------------------------------------
>  112969 0.55500 in.ksh     murphygb     qw    03/06/2010 10:20:39                                    1
> murphygb courage ~/ansys/sge :

If you have 

schedd_job_info                   true

set in your qconf -msconf settings you should be able to get an explanation of why the job is not running by using 

qsub -j 112969

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