[GE users] Altering array task range does not work

reuti reuti at staff.uni-marburg.de
Tue Mar 23 20:14:38 GMT 2010


Am 23.03.2010 um 20:07 schrieb iadzhubey:

> <snip>
> The approach I describe above uses this idea, and you can even have  
> your array
> job(s) at any position inside a pipe as long as its task range is  
> adjusted
> properly by the script run at the previous stage. I had to add all  
> of my
> execution nodes to the submit nodes list however, since qdel command  
> refuses
> to run on non-execute nodes (but why? qdel does not "execute"  
> anything so
> this is counterintuitive).

You could setup hostbased login from all nodes to your master node and  
issue:

ssh master /usr/sge/bin/lx24-amd64/qdel $JOB_ID

or alike in your jobscript avoiding making all nodes submit hosts.

-- Reuti

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