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Ticket Resolution Summary Owner Reporter
#1545 invalid SGE Buffering Python Output agrothberg
Description

For some reason SGE seems to buffer the output from Python. see: http://stackoverflow.com/questions/9876967/sge-script-print-to-file-during-execution-not-just-at-the-end or: http://stackoverflow.com/questions/26667008/sge-how-to-see-the-output-in-real-time

When I run this shell script:

echo "hello"
PYTHONUNBUFFERED=1 python -u hello_world_delay.py

with this python script:

import time
print "Hello world"

time.sleep(10)

print "Hello world"

I see the first hello printed by the shell script but I do not see the Python output at all until Python is done running.

#1544 wontfix FTBFS Scientific Linux 5/RHEL5 wish
Description

bleeding edge from DARCS doesn't build on SL5 and presumably RHEL5 bombs out with the following message: configure.ac:14: error: possibly undefined macro: AC_USE_SYSTEM_EXTENSIONS

If this token and others are legitimate, please use m4_pattern_allow. See the Autoconf documentation.

autoreconf: /usr/bin/autoconf failed with exit status: 1 error: Bad exit status from /var/tmp/rpm-tmp.3933 (%build)

RPM build errors:

Bad exit status from /var/tmp/rpm-tmp.3933 (%build)

The root cause is presumably that SL5 only provides autoconf-2.59 while the macro complained about is defined in version 2.61 AIUI.

If I understand Darcs annotate correctly this was introduced by the following patch:

Sun Apr 6 18:19:24 BST 2014 Dave Love <d.love@…>

  • Use large file macros, not ...64 functions
#1543 invalid error: commlib error: access denied (client IP resolved to host name "". This is not identical to clients host name "") agrothberg
Description

I am getting this error on a host and am trying to figure out how to diagnose more: error: commlib error: access denied (client IP resolved to host name "". This is not identical to clients host name "")

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