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Ticket Resolution Summary Owner Reporter
#490 invalid IZ2499: request new secure tunnel public key install macmccalla
Description

[Imported from gridengine issuezilla http://gridengine.sunsource.net/issues/show_bug.cgi?id=2499]

        Issue #:      2499             Platform:     All     Reporter: macmccalla (macmccalla)
       Component:     gridengine          OS:        All
     Subcomponent:    www              Version:      6.1u3      CC:    None defined
        Status:       NEW              Priority:     P3
      Resolution:                     Issue type:    PATCH
                                   Target milestone: ---
      Assigned to:    issues@gridengine
      QA Contact:     issues@gridengine
          URL:
       * Summary:     request new secure tunnel public key install
   Status whiteboard:
      Attachments:
                      Date/filename:                             Description:                     Submitted by:
                      Wed Feb 20 08:31:00 -0700 2008: id_dsa.pub new id_dsa.pub file (text/plain) macmccalla

     Issue 2499 blocks:
   Votes for issue 2499:


   Opened: Wed Feb 20 08:30:00 -0700 2008 
------------------------


hostname has changed.

   ------- Additional comments from macmccalla Wed Feb 20 08:31:50 -0700 2008 -------
Created an attachment (id=150)
new id_dsa.pub file
#541 invalid IZ2640: execd core dump andreas
Description

[Imported from gridengine issuezilla http://gridengine.sunsource.net/issues/show_bug.cgi?id=2640]

        Issue #:      2640             Platform:     PC                  Reporter: andreas (andreas)
       Component:     gridengine          OS:        Linux
     Subcomponent:    execution        Version:      6.1AR_snapshot3_8      CC:
                                                                                   [_] bbarth
                                                                                   [_] Remove selected CCs
        Status:       STARTED          Priority:     P2
      Resolution:                     Issue type:    DEFECT
                                   Target milestone: ---
      Assigned to:    pollinger (pollinger)
      QA Contact:     pollinger
          URL:
       * Summary:     execd core dump
   Status whiteboard:
      Attachments:

     Issue 2640 blocks:
   Votes for issue 2640:


   Opened: Fri Jul 4 07:49:00 -0700 2008 
------------------------


Two core dumps

$ LD_PRELOAD=/opt/sge/lib/lx24-amd64/libcore.so gdb
/opt/sge/bin/lx24-amd64/sge_execd execd.core.7420
GNU gdb Red Hat Linux (6.3.0.0-1.143.el4rh)
Copyright 2004 Free Software Foundation, Inc.
GDB is free software, covered by the GNU General Public License, and you are
welcome to change it and/or distribute copies of it under certain conditions.
Type "show copying" to see the conditions.
There is absolutely no warranty for GDB.  Type "show warranty" for details.
This GDB was configured as "x86_64-redhat-linux-gnu"...(no debugging symbols found)
Using host libthread_db library "/lib64/tls/libthread_db.so.1".

Core was generated by `/opt/sge/bin/lx24-amd64/sge_execd'.
Program terminated with signal 11, Segmentation fault.

warning: .dynamic section for "/lib64/libdl.so.2" is not at the expected address

warning: difference appears to be caused by prelink, adjusting expectations

warning: .dynamic section for "/lib64/tls/libm.so.6" is not at the expected address

warning: difference appears to be caused by prelink, adjusting expectations

warning: .dynamic section for "/lib64/tls/libpthread.so.0" is not at the
expected address

warning: difference appears to be caused by prelink, adjusting expectations

warning: .dynamic section for "/lib64/tls/libc.so.6" is not at the expected address

warning: .dynamic section for "/lib64/ld-linux-x86-64.so.2" is not at the
expected address

warning: difference appears to be caused by prelink, adjusting expectations

warning: .dynamic section for "/lib64/libresolv.so.2" is not at the expected address

warning: difference appears to be caused by prelink, adjusting expectations
Reading symbols from /opt/sge/lib/lx24-amd64/libcore.so...(no debugging symbols
found)...done.
Loaded symbols for /opt/sge/lib/lx24-amd64/libcore.so
Reading symbols from /lib64/libdl.so.2...(no debugging symbols found)...done.
Loaded symbols for /lib64/libdl.so.2
Reading symbols from /lib64/tls/libm.so.6...(no debugging symbols found)...done.
Loaded symbols for /lib64/tls/libm.so.6
Reading symbols from /lib64/tls/libpthread.so.0...(no debugging symbols
found)...done.
Loaded symbols for /lib64/tls/libpthread.so.0
Reading symbols from /lib64/tls/libc.so.6...(no debugging symbols found)...done.
Loaded symbols for /lib64/tls/libc.so.6
Reading symbols from /lib64/ld-linux-x86-64.so.2...
(no debugging symbols found)...done.
Loaded symbols for /lib64/ld-linux-x86-64.so.2
Reading symbols from /lib64/libnss_files.so.2...(no debugging symbols found)...done.
Loaded symbols for /lib64/libnss_files.so.2
Reading symbols from /lib64/libnss_dns.so.2...(no debugging symbols found)...done.
Loaded symbols for /lib64/libnss_dns.so.2
Reading symbols from /lib64/libresolv.so.2...(no debugging symbols found)...done.
Loaded symbols for /lib64/libresolv.so.2

#0  0x00000000004d97de in cl_raw_list_lock ()
(gdb) where
#0  0x00000000004d97de in cl_raw_list_lock ()
#1  0x00000000004d4bd9 in cl_commlib_app_message_queue_cleanup ()
#2  0x00000000004d3124 in cl_com_handle_service_thread ()
#3  0x00000039f7806137 in start_thread () from /lib64/tls/libpthread.so.0
#4  0x0000000000000000 in ?? ()

$ LD_PRELOAD=/opt/sge/lib/lx24-amd64/libcore.so gdb
/opt/sge/bin/lx24-amd64/sge_execd execd.core.7451
GNU gdb Red Hat Linux (6.3.0.0-1.143.el4rh)
Copyright 2004 Free Software Foundation, Inc.
GDB is free software, covered by the GNU General Public License, and you are
welcome to change it and/or distribute copies of it under certain conditions.
Type "show copying" to see the conditions.
There is absolutely no warranty for GDB.  Type "show warranty" for details.
This GDB was configured as "x86_64-redhat-linux-gnu"...(no debugging symbols found)
Using host libthread_db library "/lib64/tls/libthread_db.so.1".

Core was generated by `/opt/sge/bin/lx24-amd64/sge_execd'.
Program terminated with signal 11, Segmentation fault.

warning: .dynamic section for "/lib64/libdl.so.2" is not at the expected address

warning: difference appears to be caused by prelink, adjusting expectations

warning: .dynamic section for "/lib64/tls/libm.so.6" is not at the expected address

warning: difference appears to be caused by prelink, adjusting expectations

warning: .dynamic section for "/lib64/tls/libpthread.so.0" is not at the
expected address

warning: difference appears to be caused by prelink, adjusting expectations

warning: .dynamic section for "/lib64/tls/libc.so.6" is not at the expected address

warning: .dynamic section for "/lib64/ld-linux-x86-64.so.2" is not at the
expected address

warning: difference appears to be caused by prelink, adjusting expectations

warning: .dynamic section for "/lib64/libresolv.so.2" is not at the expected address

warning: difference appears to be caused by prelink, adjusting expectations
Reading symbols from /opt/sge/lib/lx24-amd64/libcore.so...(no debugging symbols
found)...done.
Loaded symbols for /opt/sge/lib/lx24-amd64/libcore.so
Reading symbols from /lib64/libdl.so.2...(no debugging symbols found)...done.
Loaded symbols for /lib64/libdl.so.2
Reading symbols from /lib64/tls/libm.so.6...(no debugging symbols found)...done.
Loaded symbols for /lib64/tls/libm.so.6
Reading symbols from /lib64/tls/libpthread.so.0...(no debugging symbols
found)...done.
Loaded symbols for /lib64/tls/libpthread.so.0
Reading symbols from /lib64/tls/libc.so.6...(no debugging symbols found)...done.
Loaded symbols for /lib64/tls/libc.so.6
Reading symbols from /lib64/ld-linux-x86-64.so.2...
(no debugging symbols found)...done.
Loaded symbols for /lib64/ld-linux-x86-64.so.2
Reading symbols from /lib64/libnss_files.so.2...(no debugging symbols found)...done.
Loaded symbols for /lib64/libnss_files.so.2
Reading symbols from /lib64/libnss_dns.so.2...(no debugging symbols found)...done.
Loaded symbols for /lib64/libnss_dns.so.2
Reading symbols from /lib64/libresolv.so.2...(no debugging symbols found)...done.
Loaded symbols for /lib64/libresolv.so.2

#0  0x00000000004d97de in cl_raw_list_lock ()
(gdb) where
#0  0x00000000004d97de in cl_raw_list_lock ()
#1  0x00000000004d4bd9 in cl_commlib_app_message_queue_cleanup ()
#2  0x00000000004d3124 in cl_com_handle_service_thread ()
#3  0x000000386bd06137 in start_thread () from /lib64/tls/libpthread.so.0
#4  0x0000000000000000 in ?? ()

   ------- Additional comments from andreas Fri Jul 4 08:54:02 -0700 2008 -------
Need to clarify if these stack traces are really authentic.

   ------- Additional comments from andreas Thu Jul 10 09:07:41 -0700 2008 -------
Got a slightly better stack trace:

env LD_PRELOAD=/opt/sge/lib/lx24-amd64/libcore.so gdb
/opt/sge/bin/lx24-amd64/sge_execd /share/sge/execd_spool//i155-301/core.7451
GNU gdb Red Hat Linux (6.3.0.0-1.153.el4_6.2rh)
Copyright 2004 Free Software Foundation, Inc.
GDB is free software, covered by the GNU General Public License, and you are
welcome to change it and/or distribute copies of it under certain conditions.
Type "show copying" to see the conditions.
There is absolutely no warranty for GDB.  Type "show warranty" for details.
This GDB was configured as "x86_64-redhat-linux-gnu"...(no debugging symbols found)
Using host libthread_db library "/lib64/tls/libthread_db.so.1".

Core was generated by `/opt/sge/bin/lx24-amd64/sge_execd'.
Program terminated with signal 11, Segmentation fault.
Reading symbols from /opt/sge/lib/lx24-amd64/libcore.so...(no debugging symbols
found)...done.
Loaded symbols for /opt/sge/lib/lx24-amd64/libcore.so
Reading symbols from /lib64/libdl.so.2...(no debugging symbols found)...done.
Loaded symbols for /lib64/libdl.so.2
Reading symbols from /lib64/tls/libm.so.6...
(no debugging symbols found)...done.
Loaded symbols for /lib64/tls/libm.so.6
Reading symbols from /lib64/tls/libpthread.so.0...(no debugging symbols
found)...done.
Loaded symbols for /lib64/tls/libpthread.so.0
Reading symbols from /lib64/tls/libc.so.6...
(no debugging symbols found)...done.
Loaded symbols for /lib64/tls/libc.so.6
Reading symbols from /lib64/ld-linux-x86-64.so.2...(no debugging symbols
found)...done.
Loaded symbols for /lib64/ld-linux-x86-64.so.2
Reading symbols from /lib64/libnss_files.so.2...
(no debugging symbols found)...done.
Loaded symbols for /lib64/libnss_files.so.2
Reading symbols from /lib64/libnss_dns.so.2...(no debugging symbols found)...done.
Loaded symbols for /lib64/libnss_dns.so.2
Reading symbols from /lib64/libresolv.so.2...
(no debugging symbols found)...done.
Loaded symbols for /lib64/libresolv.so.2
#0  0x00000000004d97de in cl_raw_list_lock ()
(gdb) where
#0  0x00000000004d97de in cl_raw_list_lock ()
#1  0x00000000004d4bd9 in cl_commlib_app_message_queue_cleanup ()
#2  0x00000000004d3124 in cl_com_handle_service_thread ()
#3  0x000000386bd06137 in start_thread () from /lib64/tls/libpthread.so.0
#4  0x000000386b0c7113 in clone () from /lib64/tls/libc.so.6
#721 invalid IZ3144: Array job using multiple job scripts maritac
Description

[Imported from gridengine issuezilla http://gridengine.sunsource.net/issues/show_bug.cgi?id=3144]

        Issue #:      3144             Platform:     All           Reporter: maritac (maritac)
       Component:     gridengine          OS:        All
     Subcomponent:    execution        Version:      6.2u3            CC:    None defined
        Status:       NEW              Priority:     P3
      Resolution:                     Issue type:    ENHANCEMENT
                                   Target milestone: ---
      Assigned to:    pollinger (pollinger)
      QA Contact:     pollinger
          URL:
       * Summary:     Array job using multiple job scripts
   Status whiteboard:
      Attachments:

     Issue 3144 blocks:
   Votes for issue 3144:


   Opened: Wed Sep 30 11:32:00 -0700 2009 
------------------------


I have an SGE user who has asked me to enter an enhancement request for the ability to chain multiple jobs scripts
together to form an array with one jobid number.  This would be different from the current form of array job, which
submits one job script the designated number of times.

   ------- Additional comments from reuti Thu Oct 1 04:43:42 -0700 2009 -------
What is the detail beind it: to run two or more scripts with the index 1..n or ignoring the index completely and having the ability to group
the jobscripts together for easier handling?

On the one hand you can have it right now with a selector.sh script like:

#!/bin/sh
eval SCRIPT="$"$SGE_TASK_ID
if [ ! -r "$SCRIPT" -o ! -x "$SCRIPT" ]; then
    echo "Can execute script $SCRIPT, step aborted"
    exit -1
fi
exec $SCRIPT


to submit with:

qsub -t 1-3 selector.sh script1.sh script2.sh script3.sh


If you want to group jobs together and ignore the index, you may find this RFE interesting:

http://gridengine.sunsource.net/issues/show_bug.cgi?id=2943

   ------- Additional comments from petrik Mon Oct 5 05:15:37 -0700 2009 -------
I agree with Reuti. It's easily possible right now. Unless you can provide an interesting usecase I'd suggest to close this request.

Can you ask your SGE user if Reuti's solution is what he wanted?
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