Custom Query (431 matches)
Results (7 - 9 of 431)
Ticket | Resolution | Summary | Owner | Reporter |
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#1569 | worksforme | qsub delay | Narsimha | Narsimha |
Description |
Hi all, I am facing an issue with qsub command, when a script is issued with qsub as shown below:- time qsub test.sh Your job 12973 ("test.sh") has been submitted real 0m59.665s user 0m0.126s sys 0m39.754s It took 59 sec to generate the job id. Initially there is no delay. Since a week, we are facing this issue. Kindly suggest how to resolve the issue. |
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#1573 | worksforme | [8.1.9] Installation error from source | remyd1 | |
Description |
Step to reproduce the bugs: yum install -y wget tar wget http://arc.liv.ac.uk/downloads/SGE/releases/8.1.9/sge-8.1.9.tar.gz tar -xvf sge-8.1.9.tar.gz cd sge-8.1.9 mkdir /opt/sge export SGE_ROOT=/opt/sge yum install -y java-1.8.0-openjdk.x86_64 csh make gcc ant man-1.6f-32.el6 cd source/ sh scripts/bootstrap.sh ./aimk -man -htmlman -with-munge -pam -spool-classic echo y | scripts/distinst -nobdb -local -noexit -allall lx-amd64 I tried this on centos6/amd64 and ubuntu16.04/amd64 (replacing
), and I have the same error. Some binaries are not produced. I am using the last release, the 8.1.9. The error: &<--------------------------------------------&< GUI installer part done sgeinspect dir "../nbgui" does not exist Checking and creating binary directories Installing binaries for lx-amd64 from /root/sge-8.1.9/source/LINUXAMD64 -->
Installing sge_qmaster cp: cannot stat `sge_qmaster': No such file or directory ... Installing ../3rdparty/remote/LINUXAMD64/rlogin cp: cannot stat `../3rdparty/remote/LINUXAMD64/rlogin': No such file or directory This command failed: cp ../3rdparty/remote/LINUXAMD64/rlogin /opt/sge/utilbin/lx-amd64/rlogin chown: cannot access `/opt/sge/utilbin/lx-amd64/rlogin': No such file or directory This command failed: chown 0 /opt/sge/utilbin/lx-amd64/rlogin chgrp: cannot access `/opt/sge/utilbin/lx-amd64/rlogin': No such file or directory This command failed: chgrp 0 /opt/sge/utilbin/lx-amd64/rlogin chmod: cannot access `/opt/sge/utilbin/lx-amd64/rlogin': No such file or directory This command failed: chmod 4755 /opt/sge/utilbin/lx-amd64/rlogin Installing job binaries Installing work cp: cannot stat `work': No such file or directory This command failed: cp work /opt/sge/utilbin/lx-amd64/work chown: cannot access `/opt/sge/utilbin/lx-amd64/work': No such file or directory This command failed: chown 0 /opt/sge/utilbin/lx-amd64/work chgrp: cannot access `/opt/sge/utilbin/lx-amd64/work': No such file or directory This command failed: chgrp 0 /opt/sge/utilbin/lx-amd64/work chmod: cannot access `/opt/sge/utilbin/lx-amd64/work': No such file or directory This command failed: chmod 755 /opt/sge/utilbin/lx-amd64/work Installing shared libraries &<--------------------------------------------&< |
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#1585 | worksforme | [javac] warning: [options] bootstrap class path not set in conjunction with -source 1.5 | anshuhim20@… | |
Description |
Hello SGE Experts, I have unzipped sge 8.1.9.tar file and coppied into my /home went to ...../source folder done ./scripts/bootstrap.sh Status: "Build successful.....Run ./aimk" after ./aimk warning [javac] warning: [options] bootstrap class path not set in conjunction with -source 1.5 with multiple errors like 1.error: package junit.framework does not exist
suite() { 3.fail("Unable to modify user qtask file") 4.fail("Unable to create job script"); ...etc. Kindly advise the needful Looking forward to hear from you Regards -- Himanshu Joshi M.Tech. Cognitive & Neuroscience. Ph.D Scholar, Department of Psychiatry NIMHANS, Bangalore Publications <https://scholar.google.co.in/citations?hl=en&user=OspDsGUAAAAJ&view_op=list_works&gmla=AJsN-F4EvpCnES94r26jSpcDQFnN_-rSpEtp0PNdwObxCjniNpjkL55yPooOzK6epx6bHLvPuwJ2LIL3Wgkvxn4xeZXy5Wh0NpiR4E_Ebq88a1jaCS4r5q14b_4jCaeeDct8aeK15Bxr> Multimodal Brain Image Analysis Laboratory <http://mbial.weebly.com/himanshu-joshi.html> |