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Ticket | Resolution | Summary | Owner | Reporter |
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#1585 | worksforme | [javac] warning: [options] bootstrap class path not set in conjunction with -source 1.5 | anshuhim20@… | |
Description |
Hello SGE Experts, I have unzipped sge 8.1.9.tar file and coppied into my /home went to ...../source folder done ./scripts/bootstrap.sh Status: "Build successful.....Run ./aimk" after ./aimk warning [javac] warning: [options] bootstrap class path not set in conjunction with -source 1.5 with multiple errors like 1.error: package junit.framework does not exist
suite() { 3.fail("Unable to modify user qtask file") 4.fail("Unable to create job script"); ...etc. Kindly advise the needful Looking forward to hear from you Regards -- Himanshu Joshi M.Tech. Cognitive & Neuroscience. Ph.D Scholar, Department of Psychiatry NIMHANS, Bangalore Publications <https://scholar.google.co.in/citations?hl=en&user=OspDsGUAAAAJ&view_op=list_works&gmla=AJsN-F4EvpCnES94r26jSpcDQFnN_-rSpEtp0PNdwObxCjniNpjkL55yPooOzK6epx6bHLvPuwJ2LIL3Wgkvxn4xeZXy5Wh0NpiR4E_Ebq88a1jaCS4r5q14b_4jCaeeDct8aeK15Bxr> Multimodal Brain Image Analysis Laboratory <http://mbial.weebly.com/himanshu-joshi.html> |
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#1467 | fixed | [SoGE 8.1.3] Bug: builtin method qlogin/qrsh failing | Dave Love <d.love@…> | t.mainka@… |
Description |
Hello, we experienced a problem on RHEL/CentOS 6 machines with qlogin/qrsh via the builtin starter. The job seems to be scheduled and started fine, but for some reason the shell at the end won't start and the job ends with a commlib error:
Tracing through the execd on the destination machine showed that the execle() call for the shell failed with EFAULT:
After some digging it looks like the environment array the funtion start_qlogin_job() generates isn't properly ended with a NULL pointer any more (like it was in the SGE 6.2u5 source). The attached trivial patch fixed our problems. Regards, Thomas Mainka -- Thomas Mainka science+computing ag System Administration Hagellocher Weg 73 mail: t.mainka@… 72070 Tuebingen, Germany tel.: +49 7071 9457 472 www.science-computing.de -- Vorstandsvorsitzender/Chairman? of the board of management: Gerd-Lothar Leonhart Vorstand/Board? of Management: Dr. Bernd Finkbeiner, Michael Heinrichs, Dr. Arno Steitz, Dr. Ingrid Zech Vorsitzender des Aufsichtsrats/ Chairman of the Supervisory Board: Philippe Miltin Sitz/Registered? Office: Tuebingen Registergericht/Registration? Court: Stuttgart Registernummer/Commercial? Register No.: HRB 382196 |
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#1350 | duplicate | [SGE-bugs] Error building from src.rpm on RHEL 6 | dlove | |
Description |
Adam DeConinck <adeconinck@rsystemsinc.com> writes: > On 8/10/2011 9:07 AM, Dave Love wrote: >> Adam DeConinck <adeconinck@rsystemsinc.com> writes: >> >>> Downloaded gridenine-8.0.0a-2.src.rpm from >>> http://arc.liv.ac.uk/downloads/SGE/releases/8.0.0a/. Server is a test >>> machine running RHEL 6.1 x86_64. Installed the src rpm (as root), and >>> confirmed that all dependencies were in place, then ran "rpmbuild -bb >>> --without java gridengine.spec" >>> >>> Build failed with the following output: >>> >>> echo libXmt.a >>> libXmt.a >>> gcc -c -DALLOW_COLUMN_RESIZE -DDRAW_RESIZE_SHADOW -I../Xmt310 >>> -DSGE_ARCH_STRING=\"lx-amd64\" -O3 -Wall -Wstrict-prototypes -DUSE_POLL >>> -DLINUX -DLINUXAMD64 -DLINUXAMD64 -D_GNU_SOURCE -DGETHO >>> gcc -c -DALLOW_COLUMN_RESIZE -DDRAW_RESIZE_SHADOW -I../Xmt310 >>> -DSGE_ARCH_STRING=\"lx-amd64\" -O3 -Wall -Wstrict-prototypes -DUSE_POLL >>> -DLINUX -DLINUXAMD64 -DLINUXAMD64 -D_GNU_SOURCE -DGETHO >>> gcc -c -DALLOW_COLUMN_RESIZE -DDRAW_RESIZE_SHADOW -I../Xmt310 >>> -DSGE_ARCH_STRING=\"lx-amd64\" -O3 -Wall -Wstrict-prototypes -DUSE_POLL >>> -DLINUX -DLINUXAMD64 -DLINUXAMD64 -D_GNU_SOURCE -DGETHO >>> In file included from /usr/include/X11/Xft/Xft.h:39, >>> from /usr/include/Xm/TextFP.h:47, >>> from ../Xbae/CellP.h:35, >>> from ../Xbae/Cell.c:28: >>> /usr/include/ft2build.h:56:38: error: freetype/config/ftheader.h: No >>> such file or directory This definitely looks like a system problem, but I don't understand the problem on RH6 yet. On RH5 $ cc -E - >/dev/null <<+ #include <Xm/TextFP.h> + works, but on RH6, it complains about the file, as above and, in fact, including just Xft.h fails as above. I see that the EPEL gridengine package has added export SGE_INPUT_CFLAGS="$RPM_OPT_FLAGS -I%{_includedir}/freetype2" to the spec %build section before running aimk, but I think I'll put a workaround in aimk -- patch available shortly. Thanks for the report. |