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Ticket Resolution Summary Owner Reporter
#1478 fixed Installation Bugs Dave Love <d.love@…> tobeychris@…
Description

Hello Everyone,

I would like to report the following two issues that I encountered when installing SoGE this week.

1) When using the GUI to install the qmaster, you cannot select 'classic' as the spooling method or the 'select hosts' page will be blank.

2) When installing dbwriter with a postgresql backend the startup script fails when running default/common/sgedbwriter.

For 1) I am not sure what is wrong, if you go back and select Berkeleydb and go forward, it's fine. The doesn't seem to be a way to get local spooling installed through the SoGE GUI (OGS's GUI works). I had to install the qmaster via inst_sge first, then I could install the execution hosts (with local spooling) through the GUI.

Here is the error that I get in the term that launches it:

Starting Installer ...

java.lang.NullPointerException?

at java.util.Hashtable.put(Hashtable.java:542)

at

java.util.Properties.setProperty(Properties.java:161)

at

com.izforge.izpack.installer.AutomatedInstallData?.setVariable(Unknown Source)

at

com.sun.grid.installer.gui.HostPanel?.panelActivate(HostPanel?.java:694)

at

com.izforge.izpack.installer.InstallerFrame?.switchPanel(Unknown Source)

at

com.izforge.izpack.installer.InstallerFrame?.navigateNext(Unknown Source)

at

com.izforge.izpack.installer.InstallerFrame?.navigateNext(Unknown Source)

at

com.izforge.izpack.installer.InstallerFrame?$NavigationHandler?.actionPerforme d(Unknown Source)

at

javax.swing.AbstractButton?.fireActionPerformed(AbstractButton?.java:2018)

at

javax.swing.AbstractButton?$Handler.actionPerformed(AbstractButton?.java:2341)

at

javax.swing.DefaultButtonModel?.fireActionPerformed(DefaultButtonModel?.java:4 02)

at

javax.swing.DefaultButtonModel?.setPressed(DefaultButtonModel?.java:259)

at

javax.swing.plaf.basic.BasicButtonListener?.mouseReleased(BasicButtonListener? .java:252)

at

java.awt.Component.processMouseEvent(Component.java:6505)

at

javax.swing.JComponent.processMouseEvent(JComponent.java:3312)

at

java.awt.Component.processEvent(Component.java:6270)

at

java.awt.Container.processEvent(Container.java:2229)

at

java.awt.Component.dispatchEventImpl(Component.java:4861)

at

java.awt.Container.dispatchEventImpl(Container.java:2287)

at

java.awt.Component.dispatchEvent(Component.java:4687)

at

java.awt.LightweightDispatcher?.retargetMouseEvent(Container.java:4832)

at

java.awt.LightweightDispatcher?.processMouseEvent(Container.java:4492)

at

java.awt.LightweightDispatcher?.dispatchEvent(Container.java:4422)

at

java.awt.Container.dispatchEventImpl(Container.java:2273)

at

java.awt.Window.dispatchEventImpl(Window.java:2719)

at

java.awt.Component.dispatchEvent(Component.java:4687)

at

java.awt.EventQueue?.dispatchEventImpl(EventQueue?.java:735)

at

java.awt.EventQueue?.access$200(EventQueue?.java:103)

at java.awt.EventQueue?$3.run(EventQueue?.java:694)

at java.awt.EventQueue?$3.run(EventQueue?.java:692)

at

java.security.AccessController?.doPrivileged(Native Method)

at

java.security.ProtectionDomain?$1.doIntersectionPrivilege(ProtectionDomain?.ja va:76)

at

java.security.ProtectionDomain?$1.doIntersectionPrivilege(ProtectionDomain?.ja va:87)

at java.awt.EventQueue?$4.run(EventQueue?.java:708)

at java.awt.EventQueue?$4.run(EventQueue?.java:706)

at

java.security.AccessController?.doPrivileged(Native Method)

at

java.security.ProtectionDomain?$1.doIntersectionPrivilege(ProtectionDomain?.ja va:76)

at

java.awt.EventQueue?.dispatchEvent(EventQueue?.java:705)

at

java.awt.EventDispatchThread?.pumpOneEventForFilters(EventDispatchThread?.java :242)

at

java.awt.EventDispatchThread?.pumpEventsForFilter(EventDispatchThread?.java:16 1)

at

java.awt.EventDispatchThread?.pumpEventsForHierarchy(EventDispatchThread?.java :150)

at

java.awt.EventDispatchThread?.pumpEvents(EventDispatchThread?.java:146)

at

java.awt.EventDispatchThread?.pumpEvents(EventDispatchThread?.java:138)

at

java.awt.EventDispatchThread?.run(EventDispatchThread?.java:91)

For 2) I believe the problem is the placement of two semicolons in the template file "util/sgedbwriter_template" as follows:

Line 554

  • [ -f /var/lock/subsys/sgedbwriter ] && rm -f

/var/lock/subsys/sgedbwriter;;

+ [ -f /var/lock/subsys/sgedbwriter ] && rm -f /var/lock/subsys/sgedbwriter

+ ;;

This seems to have fixed the issue for me and I was able to install the dbwriter.

Some information about my setup:

Systems:

5 x Haswell 4770k with 32GB RAM

CentOS 6.4 (64bit) with X11

Sons of Grid Engine 8.1.5 RPMs and tars taken directly from site.

SGE_ROOT is on an NFSv3 share on a separate server (hence the local spooling).

Thanks,

-Chris

#1484 fixed CSP initialisation broken Dave Love <d.love@…> markdixon
Description

Hi,

I think this commit has broken "sge_ca -init", called during installation to initialise an x509 CA when gridengine runs in CSP mode:

commit 3b435c132b22bc9499db7106074027a65aef6ecc Author: Dave Love <d.love@…> Date: Wed Jun 19 18:37:59 2013 +0000

Remove sge_ssl.cnf

It seems to be down to the fact that sge_ssl.cnf and sge_ssl_template.cnf differ in this respect: one has "prompt=yes" set, the other "prompt=no".

The "prompt" directive alters how some other options are interpreted (see http://www.openssl.org/docs/apps/req.html for details), causing the problem.

Mark

#1488 fixed SoGE 8.1.6 GUI Crash Dave Love <d.love@…> tobeychris@…
Description

Hi,

I ran into this error on a new CentOS 6.4 x64 installation with SoGE 8.1.6.

# ./start_gui_installer

Starting Installer ...

java.lang.reflect.InvocationTargetException?

at

sun.reflect.NativeConstructorAccessorImpl?.newInstance0(Native Method)

at

sun.reflect.NativeConstructorAccessorImpl?.newInstance(NativeConstructorAcces? sorImpl.java:57)

at

sun.reflect.DelegatingConstructorAccessorImpl?.newInstance(DelegatingConstruc? torAccessorImpl.java:45)

at

java.lang.reflect.Constructor.newInstance(Constructor.java:526)

at

com.izforge.izpack.installer.InstallerFrame?.loadPanels(Unknown Source)

at

com.izforge.izpack.installer.InstallerFrame?.<init>(Unknown Source)

at com.izforge.izpack.installer.GUIInstaller.loadGUI(Unknown

Source)

at

com.izforge.izpack.installer.GUIInstaller.access$100(Unknown Source)

at com.izforge.izpack.installer.GUIInstaller$2.run(Unknown

Source)

at

java.awt.event.InvocationEvent?.dispatch(InvocationEvent?.java:251)

at

java.awt.EventQueue?.dispatchEventImpl(EventQueue?.java:733)

at java.awt.EventQueue?.access$200(EventQueue?.java:103)

at java.awt.EventQueue?$3.run(EventQueue?.java:694)

at java.awt.EventQueue?$3.run(EventQueue?.java:692)

at java.security.AccessController?.doPrivileged(Native

Method)

at

java.security.ProtectionDomain?$1.doIntersectionPrivilege(ProtectionDomain?.ja va:76)

at java.awt.EventQueue?.dispatchEvent(EventQueue?.java:703)

at

java.awt.EventDispatchThread?.pumpOneEventForFilters(EventDispatchThread?.java :242)

at

java.awt.EventDispatchThread?.pumpEventsForFilter(EventDispatchThread?.java:16 1)

at

java.awt.EventDispatchThread?.pumpEventsForHierarchy(EventDispatchThread?.java :150)

at

java.awt.EventDispatchThread?.pumpEvents(EventDispatchThread?.java:146)

at

java.awt.EventDispatchThread?.pumpEvents(EventDispatchThread?.java:138)

at

java.awt.EventDispatchThread?.run(EventDispatchThread?.java:91)

Caused by: java.lang.NullPointerException?

at

java.text.MessageFormat?.applyPattern(MessageFormat?.java:436)

at java.text.MessageFormat?.<init>(MessageFormat?.java:363)

at java.text.MessageFormat?.format(MessageFormat?.java:835)

at

com.sun.grid.installer.gui.HostTable?.createPopupMenu(HostTable?.java:220)

at

com.sun.grid.installer.gui.HostTable?.initPopupMenu(HostTable?.java:99)

at

com.sun.grid.installer.gui.HostTable?.<init>(HostTable?.java:66)

at

com.sun.grid.installer.gui.HostPanel?.init(HostPanel?.java:276)

at

com.sun.grid.installer.gui.HostPanel?.<init>(HostPanel?.java:151)

... 23 more

Any thoughts on the cause / what I can do to fix this?

If there is something I can run to produce more useful logs let me know.

-Chris

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