Opened 6 months ago

Last modified 6 months ago

#1642 new defect

issues building with jemalloc 5 - cannot allocate memory in static TLS block

Reported by: afif Owned by:
Priority: normal Milestone:
Component: sge Version: 8.1.9
Severity: minor Keywords:
Cc:

Description

While trying again to get the Debian package for 8.1.9 to build with recent Java, I'm now hitting issues with jemalloc. I'm using the code state at https://salsa.debian.org/hpc-team/gridengine/tree/java10

The full build log is attached.

[java] [java] BUILD FAILED
[java] [java] /<<BUILDDIR>>/gridengine-8.1.9+dfsg/source/libs/jgdi/build.xml:495: java.lang.UnsatisfiedLinkError?: /<<BUILDDIR>>/gridengine-8.1.9+dfsg/source/LINUXAMD64/libdrmaa.so: /usr/lib/x86_64-linux-gnu/libjemalloc.so.2: cannot allocate memory in static TLS block
[java] [java] at java.base/java.lang.ClassLoader?$NativeLibrary?.load0(Native Method)
[java] [java] at java.base/java.lang.ClassLoader?$NativeLibrary?.load(ClassLoader?.java:2430)
[java] [java] at java.base/java.lang.ClassLoader?$NativeLibrary?.loadLibrary(ClassLoader?.java:2487)
[java] [java] at java.base/java.lang.ClassLoader?.loadLibrary0(ClassLoader?.java:2684)
[java] [java] at java.base/java.lang.ClassLoader?.loadLibrary(ClassLoader?.java:2649)
[java] [java] at java.base/java.lang.Runtime.loadLibrary0(Runtime.java:829)
[java] [java] at java.base/java.lang.System.loadLibrary(System.java:1867)
[java] [java] at com.sun.grid.cull.CullConstantConverter?.<clinit>(CullConstantConverter?.java:43)
[java] [java] at java.base/java.lang.Class.forName0(Native Method)
[java] [java] at java.base/java.lang.Class.forName(Class.java:315)
[java] [java] at com.sun.grid.cull.ant.ConverterDefinition?.createConverter(ConverterDefinition?.java:90)
[java] [java] at com.sun.grid.cull.ant.JavaConverterDefinition?.createConverter(JavaConverterDefinition?.java:63)
[java] [java] at com.sun.grid.cull.ant.CullConvAntTask?.execute(CullConvAntTask?.java:169)
[java] [java] at org.apache.tools.ant.UnknownElement?.execute(UnknownElement?.java:292)
[java] [java] at jdk.internal.reflect.GeneratedMethodAccessor4.invoke(Unknown Source)
[java] [java] at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl?.invoke(DelegatingMethodAccessorImpl?.java:43)
[java] [java] at java.base/java.lang.reflect.Method.invoke(Method.java:566)
[java] [java] at org.apache.tools.ant.dispatch.DispatchUtils?.execute(DispatchUtils?.java:99)
[java] [java] at org.apache.tools.ant.Task.perform(Task.java:350)
[java] [java] at org.apache.tools.ant.Target.execute(Target.java:449)
[java] [java] at org.apache.tools.ant.Target.performTasks(Target.java:470)
[java] [java] at org.apache.tools.ant.Project.executeSortedTargets(Project.java:1388)
[java] [java] at org.apache.tools.ant.Project.executeTarget(Project.java:1361)
[java] [java] at org.apache.tools.ant.helper.DefaultExecutor?.executeTargets(DefaultExecutor?.java:41)
[java] [java] at org.apache.tools.ant.Project.executeTargets(Project.java:1251)
[java] [java] at org.apache.tools.ant.Main.runBuild(Main.java:834)
[java] [java] at org.apache.tools.ant.Main.startAnt(Main.java:223)
[java] [java] at org.apache.tools.ant.launch.Launcher.run(Launcher.java:284)
[java] [java] at org.apache.tools.ant.launch.Launcher.main(Launcher.java:101)
[java] [java]
[java] [java] Total time: 4 seconds
[java]
[java] BUILD FAILED
[java] /<<BUILDDIR>>/gridengine-8.1.9+dfsg/source/libs/jgdi/build.xml:416: Java returned: 1
[java]
[java] Total time: 5 seconds

BUILD FAILED
/<<BUILDDIR>>/gridengine-8.1.9+dfsg/source/build.xml:85: The following error occurred while executing this line:
/<<BUILDDIR>>/gridengine-8.1.9+dfsg/source/build.xml:30: Java returned: 1

gridengine_8.1.9+dfsg-9_amd64-2019-01-13T00:22:44Z.build

Attachments (1)

gridengine_8.1.9+dfsg-9_amd64-2019-01-13T00:22:44Z.build.gz (50.1 KB) - added by afif 6 months ago.

Download all attachments as: .zip

Change History (2)

comment:1 Changed 6 months ago by afif

None
File gridengine_8.1.9+dfsg-9_amd64-2019-01-13T00:22:44Z.build is larger then allowed attachment size (861391 > 262144)

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